$NetBSD$ # Support python 3 --- eggnogmapper/server.py.orig 2018-11-06 00:18:53 UTC +++ eggnogmapper/server.py @@ -30,7 +30,7 @@ def server_functional(host, port, dbtype if server_up(host, port): try: search.get_hits("test", "TESTSEQ", host, port, dbtype) - except Exception, e: + except(Exception, e): #print 'Server not ready', e return False else: @@ -94,7 +94,7 @@ def generate_idmap(dbpath): if dbpath.endswith(".h3f"): dbpath = dbpath.replace(".h3f", "") cmd = """%s %s |grep -v '#'|awk '{print $1" "$2}' > %s""" %(HMMSTAT, dbpath, dbpath+'.idmap') - print colorify(cmd, "cyan") + print(colorify(cmd, "cyan")) print('Generating idmap in '+dbpath+'.idmap') return os.system(cmd) == 0