$NetBSD$

# Unbundle deps, build scaffold_iworm_contigs
--- trinity-plugins/Makefile.orig	2018-08-22 01:25:08 UTC
+++ trinity-plugins/Makefile
@@ -9,12 +9,11 @@ TRIMMOMATIC_CODE=Trimmomatic-0.36
 
 
 
-trinity_essentials: seqtk_target parafly_target trimmomatic_target
+trinity_essentials: scaffold_iworm_contigs_target seqtk_target
 
 trimmomatic_target:
 	ln -sf ${TRIMMOMATIC_CODE} Trimmomatic
 
-
 seqtk_target:
 	cd seqtk-trinity-0.0.2 && $(MAKE) CXX=$(CXX) CC=$(CC)
 	mv seqtk-trinity-0.0.2/seqtk-trinity ./BIN/.
@@ -24,12 +23,14 @@ parafly_target:
 	cd ${PARAFLY_CODE} && sh ./configure --prefix=`pwd` CXX=$(CXX) CC=$(CC) CFLAGS="-fopenmp" CXXFLAGS="-fopenmp" && $(MAKE) install && \
 	cp bin/ParaFly ../BIN/
 
+scaffold_iworm_contigs_target:
+	cd scaffold_iworm_contigs && $(MAKE)
 
 ##################################
 ### Needed for downstream analyses
 ##################################
 
-plugins: slclust_target collectl_target
+plugins: collectl_target
 	@echo "\n\n** Done building plugins **\n\n"