$NetBSD$

--- dnaindex/makefile.orig	2014-06-19 15:10:23.000000000 +0000
+++ dnaindex/makefile
@@ -26,17 +26,17 @@ ASSEMBLY_OBJ  = kmer_assembly.o \
 all: $(ASSEMBLY_OBJ)
 
 find_single_kmers : find_single_kmers.o dnamapping.o
-	$(CC) -o find_single_kmers find_single_kmers.o dnamapping.o -ldyna -lwisebase $(LFLAGS) `glib-config --libs`
+	$(CC) -o find_single_kmers find_single_kmers.o dnamapping.o -ldyna -lwisebase $(LFLAGS)
 
 kwise : kwise.o $(ASSEMBLY_OBJ)
-	$(CC) -o kwise kwise.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS) `glib-config --libs`
+	$(CC) -o kwise kwise.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS)
 
 arraymatcher : arraymatcher.o $(ASSEMBLY_OBJ) 
-	$(CC) -o arraymatcher arraymatcher.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS) `glib-config --libs`
+	$(CC) -o arraymatcher arraymatcher.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS)
 
 
 findbad_kmer : findbad_kmer.o $(ASSEMBLY_OBJ)
-	$(CC) -o findbad_kmer findbad_kmer.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS) `glib-config --libs`
+	$(CC) -o findbad_kmer findbad_kmer.o $(ASSEMBLY_OBJ)  -ldyna -lwisebase $(LFLAGS)
 
 make_shotgun : make_shotgun.o shotgun.o
 	$(CC) -o make_shotgun make_shotgun.o shotgun.o -ldyna -lwisebase $(LFLAGS)
@@ -72,10 +72,10 @@ show_euler : show_euler.o eulerindex.o s
 	$(CC) -o show_euler show_euler.o eulerindex.o singleseqspace.o -ldyna -lwisebase $(LFLAGS)
 
 CC = cc
-CFLAGS = -pthread -c  -DHAS_PTHREAD_SETSCOPE -g -DUNIX -I../base/ -I../dynlibsrc/ `glib-config --cflags`
+CFLAGS = -pthread -c  -DHAS_PTHREAD_SETSCOPE -g -DUNIX -I../base/ -I../dynlibsrc/
 
 
-LFLAGS =  -g -L../base/ -L../dynlibsrc/ -lpthread `glib-config --libs` -lm
+LFLAGS =  -g -L../base/ -L../dynlibsrc/ -lpthread -lm
 
 
 .c.o :