# $NetBSD$
#
###########################################################
#               Generated by fbsd2pkg                     #
###########################################################

DISTNAME=	jellyfish-${PORTVERSION}
CATEGORIES=	biology
MASTER_SITES=	${MASTER_SITE_GITHUB:=gmarcais/}
MAINTAINER=	bacon4000@gmail.com
HOMEPAGE=	http://www.genome.umd.edu/jellyfish.html
GITHUB_TAG=	v${PORTVERSION}

COMMENT=	Fast, memory-efficient counting of k-mers in DNA
LICENSE=	gnu-gpl-v3

USE_TOOLS=	autoreconf autoconf automake
USE_LANGUAGES=	c c++
USE_LIBTOOL=	yes
GNU_CONFIGURE=	yes

DEPENDS+=	yaggo>=0:../../wip/yaggo

CFLAGS=		-fopenmp

CXXFLAGS+=	-std=c++0x

WRKSRC=		${WRKDIR}/Jellyfish-${PORTVERSION}

PORTVERSION=	2.2.6

pre-configure:
	cd ${WRKSRC} && autoreconf -if

.include "../../mk/bsd.pkg.mk"
