# $NetBSD$
#
###########################################################
#               Generated by fbsd2pkg                     #
###########################################################

DISTNAME=	Trimmomatic-${PORTVERSION}
CATEGORIES=	biology
MASTER_SITES=	http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/
EXTRACT_SUFX=	.zip

MAINTAINER=	bacon4000@gmail.com
HOMEPAGE=	http://www.usadellab.org/cms/?page=trimmomatic
COMMENT=	Flexible read trimming tool for Illumina NGS data
LICENSE=	gnu-gpl-v3

# Use Yum's java for now
# USE_JAVA=	run

# Just assuming C and C++: Adjust this!
USE_TOOLS+=	pax
NO_BUILD=	yes

WRKSRC=		${WRKDIR}/Trimmomatic-${PORTVERSION}

PORTVERSION=	0.35
DATADIR=	${PREFIX}/share/Trimmomatic

INSTALLATION_DIRS=	bin lib/java share/Trimmomatic

do-install:
	${INSTALL_DATA} ${WRKSRC}/trimmomatic-0.35.jar ${DESTDIR}${PREFIX}/lib/java/trimmomatic.jar
	cd ${WRKSRC} && pax -rw adapters ${DESTDIR}${DATADIR}

.include "../../mk/bsd.pkg.mk"
