# $NetBSD$
#
###########################################################
#                  Generated by fbsd2pkg                  #
#              Fri Sep 14 15:34:17 CDT 2018               #
###########################################################

DISTNAME=	Trimmomatic-${PV}
CATEGORIES=	biology
MASTER_SITES=	http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/
EXTRACT_SUFX=	.zip

MAINTAINER=	bacon@NetBSD.org
HOMEPAGE=	http://www.usadellab.org/cms/?page=trimmomatic
COMMENT=	Flexible read trimming tool for Illumina NGS data
LICENSE=	gnu-gpl-v3

USE_LANGUAGES=	c c++
USE_TOOLS+=	pax
USE_JAVA=	run
NO_BUILD=	yes

PV=		0.38
DATADIR=	${PREFIX}/share/trimmomatic
JAVAJARDIR=	${PREFIX}/share/java/classes

INSTALLATION_DIRS=	share/trimmomatic share/java/classes

do-install:
	${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PV}.jar \
		${DESTDIR}${JAVAJARDIR}/trimmomatic.jar
	cd ${WRKSRC} && pax -rw adapters ${DESTDIR}${DATADIR}

.include "../../mk/bsd.pkg.mk"
